MiMoSA is a workflow to cluster single-cells using RPKM measure output by the MapRSeq pipeline developed at Mayo Clinic. The code is designed for R versions 3.2 or greater. The tool needs the RPKM measure for baseline and treated cells, their corresponding gene counts.
MiMoSA runs on all 3rd generation and later Intel Processors, suggested-minimum RAM of 8GB and suggested minimum disk-space of 100GB. R-studio compatible.
This work is a joint collaboration between Mayo Clinic and the University of Illinois at Urbana-Champaign.
Link to the tool: http://web.engr.illinois.edu/~athreya2/MiMoSA.zip